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Species belonging to selected taxon:

Gadus morhua



ABOUT THIS RECORD

ID: MNEST007424
species: Gadus morhua
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGGTGCAAAAGTGAGGGCA

miRNA*
CCCTCCTTTGGCAACAGCAC

mismatches: 4
bulges: 1

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pre-miRNA
ATGAGGAGAATGCCCTCCTTTGGCAACAGCACGAGAACCACCACAACAACAAACTCTGTTGGGCGGATTGTCAATGTGCCGCTGGTGCAAAAGTGAGGGC
A
TTCATTCTA


dot-bracket secondary structure
...((((((((((((((((((.(((.(((((((.((.((.((.(((((........))))))).))....))..)))))...)).))).)))).))))))
)
))).)))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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